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Antibodies are essential tools in life sciences and are applied in many research areas. However, specificity of mono- and polyclonal antibodies and hence their ability to generate reliable and robust data is under scrutiny in the scientific community. Unspecific binding to non-target antigens may lead to inconclusive or misleading data, and thus to a waste of time, money and samples. Highly specific antibodies are a prerequisite to generate reliable results, emphasizing the urgent need for appropriate validation methods in order to determine antibody specificity and cross-reactivity.



PEPperCHIP® Peptide Microarrays & Services

Antibody Validation

PEPperPRINT offers a number of innovative solutions for antibody validation and in-depth analysis of epitopes for a wide range of antibody formats and isotypes.

These solutions cover a range of applications for e.g.

  • Identify linear & conformational epitopes with highest amino acid resolution

  • Determine conserved & variable amino acids by full peptide substitution scans

  • Analyse cross-reactions and off-targets effects of research, diagnostic and therapeutic antibodies

  • Generate antibody fingerprint profiles for seum biomarker discovery

  • Human Epitome Microarray with 29, 128 linear human B-cell epitopes

  • Epitome-wide antibody profiling

  • Analaysis of mono- & polyclonal antibodies, serum & plasma

  • Bioinformatic analysis to identify common binding motifs



  • Microarray with antigen(s) as overlapping peptides

  • Epitope identification with amino acid resolution

  • 15 amino acid liner or 7, 10 & 13 amino acid cyclic constrained peptides with max. peptide-peptide overlap

  • From single to multiple antigens in a single assay

  • Exchange of all amino acid positions of a wild type peptide with the 20 natural amino acids

  • Identification of essential conserved & variable amino acid positions

  • Unambiquous identification of epitope lengths & epiptope variants

  • Assessments of antibody selectivity & cross-reactivity

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Step 1: Project initiation

  • Describe your scientific aim

  • Submit your protein sequence(s) of interest

  • Provide your antibody or serum samples

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Step 2: Microarray production

  • Microarray design

  • Peptide printing

  • Final quality control

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Step 3: PEPperMAP® Service

  • On-chip immunoassays

  • Microarray read-out

  • Data evaluation

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Step 4: Scientific Reporting

  • Incl. material & methods

  • All experimental details, raw and formatted data

  • Data discussion & conclusion